STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60651.1TIGRFAM: Conserved hypothetical protein CHP03492; KEGG: pmf:P9303_26251 hypothetical protein. (400 aa)    
Predicted Functional Partners:
EHA60650.1
KEGG: pmt:PMT1970 hypothetical protein.
 
     0.831
EHA60543.1
KEGG: pmf:P9303_03231 lipid A disaccharide synthetase-like protein.
 
  
  0.825
EHA60652.1
KEGG: pmt:PMT1972 hypothetical protein.
 
     0.824
EHA63304.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: pmf:P9303_16801 putative permease.
 
     0.656
EHA60649.1
Iron-sulfur cluster assembly accessory protein; KEGG: pmf:P9303_26221 hypothetical protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family.
       0.656
EHA62243.1
KEGG: pmt:PMT1833 hypothetical protein.
  
     0.654
EHA60205.1
KEGG: pmf:P9303_21381 hypothetical protein.
  
     0.621
ndhO
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.577
EHA61750.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.576
EHA64054.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmt:PMT0446 hypothetical protein.
  
     0.565
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.