STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcS-2Protein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (158 aa)    
Predicted Functional Partners:
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
       0.811
era
GTP-binding protein Era-like-protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.713
cpcT
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
     
 0.673
EHA60069.1
TIGRFAM: Alpha-acetolactate decarboxylase; KEGG: mpl:Mpal_1761 acetolactate decarboxylase; PFAM: Alpha-acetolactate decarboxylase.
       0.664
EHA59370.1
PFAM: PBS lyase HEAT-like repeat; KEGG: syf:Synpcc7942_1054 heat repeat-containing PBS lyase; overlaps another CDS with the same product name.
     
 0.651
cpcT-2
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
     
 0.506
EHA59383.1
KEGG: pmt:PMT1679 putative bilin biosynthesis protein CpeY; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat.
     
 0.493
EHA60070.1
KEGG: pmf:P9303_19481 hypothetical protein.
       0.477
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.