STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60073.1PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein. (195 aa)    
Predicted Functional Partners:
EHA60071.1
PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein; Belongs to the OprB family.
 
     0.760
EHA60074.1
PFAM: General substrate transporter; KEGG: pmf:P9303_19521 hypothetical protein.
       0.732
EHA60072.1
KEGG: pmf:P9303_19511 hypothetical protein.
       0.689
EHA60075.1
PFAM: General substrate transporter; KEGG: pmf:P9303_19521 hypothetical protein.
       0.607
EHA62402.1
PFAM: PilT protein, N-terminal; KEGG: tmz:Tmz1t_3887 PilT protein domain protein.
  
     0.589
EHA64429.1
PFAM: Cupin 2, conserved barrel; KEGG: pmf:P9303_16011 hypothetical protein.
  
     0.569
EHA60426.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_04571 methylase.
  
     0.401
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.