STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60075.1PFAM: General substrate transporter; KEGG: pmf:P9303_19521 hypothetical protein. (267 aa)    
Predicted Functional Partners:
EHA60074.1
PFAM: General substrate transporter; KEGG: pmf:P9303_19521 hypothetical protein.
   
 0.991
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
    
 0.659
EHA62472.1
KR domain protein; KEGG: gvi:gll4226 modular polyketide synthase; PFAM: Polyketide synthase, KR; SMART: Polyketide synthase/Fatty acid synthase, KR.
    
 0.659
EHA60073.1
PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein.
       0.607
EHA60072.1
KEGG: pmf:P9303_19511 hypothetical protein.
       0.545
EHA60076.1
KEGG: pmt:PMT0352 integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
       0.472
EHA63150.1
TIGRFAM: NHPM bacteriocin system secretion protein, HylD; KEGG: ana:all2022 hypothetical protein.
   
  0.433
EHA63828.1
TIGRFAM: ABC transporter membrane fusion protein, DevB type; KEGG: pmt:PMT0589 ABC transporter.
   
  0.433
EHA64115.1
PFAM: Secretion protein HlyD; KEGG: ftn:FTN_1276 membrane fusion protein.
   
  0.433
EHA62215.1
KEGG: pmt:PMT0979 hypothetical protein.
   
  0.433
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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