STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60076.1KEGG: pmt:PMT0352 integral membrane protein, interacts with FtsH; Belongs to the BI1 family. (243 aa)    
Predicted Functional Partners:
EHA63253.1
KEGG: pmf:P9303_13951 hypothetical protein.
  
   
 0.771
EHA63329.1
KEGG: pmt:PMT0769 hypothetical protein.
  
     0.766
EHA60652.1
KEGG: pmt:PMT1972 hypothetical protein.
  
     0.765
EHA63456.1
KEGG: pmt:PMT0671 hypothetical protein.
  
     0.750
EHA61781.1
KEGG: pmt:PMT2006 hypothetical protein.
  
     0.729
EHA62511.1
PFAM: HTH transcriptional regulator, GntR; KEGG: pmf:P9303_01531 putative transcriptional regulator.
  
     0.728
EHA61755.1
KEGG: pmf:P9303_26291 4-amino-4-deoxy-L-arabinose transferase.
  
     0.727
EHA60547.1
PFAM: Uncharacterised protein family Ycf66; KEGG: pmt:PMT1591 hypothetical protein.
  
     0.722
EHA64384.1
KEGG: pmf:P9303_05641 hypothetical protein.
  
     0.707
EHA60105.1
KEGG: pmt:PMT0325 hypothetical protein.
  
     0.701
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.