close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60094.1KEGG: pmt:PMT0338 hypothetical protein. (222 aa)    
Predicted Functional Partners:
EHA63146.1
KEGG: pmt:PMT1075 hypothetical protein.
  
     0.711
trpC
KEGG: pmf:P9303_19771 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.581
EHA60096.1
TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: pmf:P9303_19781 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation.
       0.565
EHA60097.1
PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: pmf:P9303_19791 tRNA/rRNA methyltransferase (SpoU).
       0.565
EHA60098.1
KEGG: pmf:P9303_19801 hypothetical protein.
       0.565
EHA63658.1
GUN4 domain protein; PFAM: GUN4-like; KEGG: pmt:PMT0606 hypothetical protein.
  
     0.448
EHA60080.1
KEGG: pmf:P9303_19571 hypothetical protein.
  
     0.448
EHA63626.1
PFAM: Protein of unknown function DUF1350; KEGG: pmt:PMT0388 hypothetical protein.
  
     0.429
EHA63233.1
PFAM: FAD linked oxidase, N-terminal; KEGG: pmf:P9303_12191 FAD linked oxidase, N-terminal.
  
     0.408
EHA59154.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmf:P9303_00551 putative photosystem I assembly related protein Ycf37.
  
     0.401
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.