STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60106.1PFAM: Protein of unknown function DUF1611; KEGG: cyt:cce_1278 hypothetical protein. (359 aa)    
Predicted Functional Partners:
EHA60107.1
KEGG: npu:Npun_R6604 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal.
 
     0.885
EHA60105.1
KEGG: pmt:PMT0325 hypothetical protein.
 
     0.622
EHA60104.1
PFAM: Amidohydrolase 3; KEGG: pmt:PMT0326 putative cytosine deaminase.
 
     0.561
EHA60103.1
PFAM: FAD linked oxidase, N-terminal; KEGG: pmf:P9303_19871 FAD/FMN-containing dehydrogenase.
 
     0.466
EHA61773.1
PFAM: Domain of unknown function DUF218; KEGG: pmf:P9303_26581 hypothetical protein.
  
     0.445
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.407
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.