Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA60174.1Pilin; KEGG: pmf:P9303_20881 pilin. (166 aa)    
Predicted Functional Partners:
EHA60177.1
KEGG: ana:alr7304 hypothetical protein.
  
 0.951
EHA59120.1
PFAM: Type II secretion system protein E; KEGG: pmf:P9303_00191 general secretion pathway protein E.
 
 0.943
EHA59118.1
PFAM: Type II secretion system F domain; KEGG: pmf:P9303_00171 pili biogenesis protein.
 
  
 0.933
EHA63879.1
Prepilin peptidase; KEGG: pmt:PMT0533 putative type 4 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV.
 
  
 0.723
EHA59119.1
Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: pmf:P9303_00181 PilT1-like protein; SMART: ATPase, AAA+ type, core.
 
   
 0.598
EHA60175.1
KEGG: amr:AM1_5882 hypothetical protein.
     
 0.579
EHA64354.1
Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: pmt:PMT1313 homologous to PilT2 protein; SMART: ATPase, AAA+ type, core.
 
   
 0.555
EHA60176.1
Hypothetical protein; KEGG: syf:Synpcc7942_2590 pilin-like protein-like.
       0.554
EHA63514.1
Conserved hypothetical protein CHP00730; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; KEGG: pmn:PMN2A_0462 putative DapE gene and orf2.
  
  
 0.507
EHA60173.1
KEGG: pmf:P9303_20811 signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
       0.502
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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