STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60176.1Hypothetical protein; KEGG: syf:Synpcc7942_2590 pilin-like protein-like. (179 aa)    
Predicted Functional Partners:
EHA60177.1
KEGG: ana:alr7304 hypothetical protein.
  
 0.989
EHA59120.1
PFAM: Type II secretion system protein E; KEGG: pmf:P9303_00191 general secretion pathway protein E.
  
 0.884
EHA59118.1
PFAM: Type II secretion system F domain; KEGG: pmf:P9303_00171 pili biogenesis protein.
  
  
 0.812
EHA60175.1
KEGG: amr:AM1_5882 hypothetical protein.
     
 0.794
EHA60174.1
Pilin; KEGG: pmf:P9303_20881 pilin.
       0.554
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
   
  
 0.464
EHA60178.1
Hypothetical protein.
       0.461
EHA60169.1
KEGG: pmf:P9303_20831 hypothetical protein.
    
 0.427
EHA59419.1
SMF family protein; PFAM: DNA recombination-mediator protein A; KEGG: pmt:PMT1661 smf family protein.
   
  
 0.420
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.