STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60187.1PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: pmt:PMT0233 putative L-cysteine/cystine lyase. (402 aa)    
Predicted Functional Partners:
EHA63057.1
PFAM: Fe-S metabolism associated SufE; KEGG: pmf:P9303_08891 hypothetical protein.
  
 0.940
EHA60565.1
TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: pmt:PMT1605 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 
 0.891
EHA59339.1
UBA/THIF-type NAD/FAD binding protein; KEGG: pmf:P9303_22891 molybdopterin biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like.
    
 0.862
EHA60564.1
SufBD protein; PFAM: SUF system FeS cluster assembly, SufBD; KEGG: pmf:P9303_03041 ABC transporter, membrane component.
 
 0.840
EHA63389.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.824
EHA60566.1
FeS assembly protein SufB; KEGG: pmf:P9303_03021 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD.
 
 0.818
EHA63025.1
TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.
 
 
 0.783
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.725
EHA62321.1
KEGG: pmf:P9303_25471 selenide, water dikinase; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; Selenide water dikinase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; AIR synthase-related protein; AIR synthase-related protein, C-terminal.
    
 0.699
EHA60199.1
KEGG: pmt:PMT0226 putative cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme.
  
  
 0.659
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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