STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60189.1PFAM: Extracellular ligand-binding receptor; KEGG: cti:RALTA_A2748 putative ABC-type branched-chain amino acid transporter, periplasmic binding component. (402 aa)    
Predicted Functional Partners:
EHA62013.1
KEGG: pmf:P9303_29721 putative membrane protein of UreA ABC transport system; TIGRFAM: ABC transporter, urea, permease protein, UrtC; PFAM: ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.832
EHA62014.1
KEGG: pmf:P9303_29731 putative UreA ABC transporter; TIGRFAM: ABC transporter, urea, permease protein, UrtB; PFAM: ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.820
EHA62011.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: pmf:P9303_29701 putative ATP-binding subunit of UreA ABC transport system; PFAM: ABC transporter-like.
 
 
 0.690
EHA61918.1
CheW protein; KEGG: dak:DaAHT2_2535 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
 
 
 
 0.645
EHA60190.1
Calcium/proton antiporter, CaCA family; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
       0.618
EHA63227.1
KEGG: pmf:P9303_12111 ABC transporter for amino acids, membrane component; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
  
 
 0.602
EHA63226.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmt:PMT0893 ABC transporter for amino acids, ATP binding component; SMART: ATPase, AAA+ type, core.
  
  
 0.584
EHA62012.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; KEGG: pmf:P9303_29711 putative ATP binding subunit of UreA ABC transport system; PFAM: ABC transporter-like.
 
  
 0.564
EHA60188.1
KEGG: pmf:P9303_21331 hypothetical protein.
       0.564
EHA64316.1
KEGG: pmt:PMT1349 hypothetical protein.
     
 0.452
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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