STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60190.1Calcium/proton antiporter, CaCA family; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons. (381 aa)    
Predicted Functional Partners:
EHA60189.1
PFAM: Extracellular ligand-binding receptor; KEGG: cti:RALTA_A2748 putative ABC-type branched-chain amino acid transporter, periplasmic binding component.
       0.618
EHA60188.1
KEGG: pmf:P9303_21331 hypothetical protein.
       0.459
EHA63898.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; KEGG: aba:Acid345_1729 ErfK/YbiS/YcfS/YnhG.
  
    0.447
EHA63142.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
      0.446
EHA60485.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; KEGG: pmf:P9303_07261 hypothetical protein.
  
    0.424
EHA63599.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; KEGG: pmt:PMT0404 hypothetical protein.
  
    0.422
EHA64234.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; KEGG: pmt:PMT1274 hypothetical protein.
  
    0.422
EHA60418.1
KEGG: pmt:PMT1482 rRNA methyltransferase; TIGRFAM: Hemolysin A; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4.
      
 0.408
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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