STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60212.1PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_21451 putative glycosyl transferase, group 1. (395 aa)    
Predicted Functional Partners:
EHA60599.1
TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: pmf:P9303_02541 putative potassium channel, VIC family.
     
 0.879
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
 
     0.790
EHA60211.1
PFAM: Major facilitator superfamily MFS-1; KEGG: pmt:PMT0210 MFS superfamily transporter.
       0.755
EHA60209.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.754
EHA60240.1
Maltose alpha-D-glucosyltransferase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: cyb:CYB_0677 trehalose synthase/putative maltokinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
    
 0.749
EHA60598.1
H(+)-transporting two-sector ATPase; KEGG: pmf:P9303_02551 putative sodium transporter, trk family; PFAM: Cation transporter.
    
 0.741
hpf
Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.687
EHA63890.1
KEGG: pmj:P9211_09671 hypothetical protein.
  
     0.681
EHA63636.1
KEGG: pmj:P9211_10191 hypothetical protein.
  
     0.673
EHA63183.1
KEGG: npu:Npun_F3905 hypothetical protein.
  
     0.665
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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