STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sepFCell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (191 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.944
EHA60215.1
Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.877
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
     
 0.823
EHA61948.1
Aluminum resistance family protein; PFAM: Aluminium resistance; KEGG: pmf:P9303_28921 cystathionine beta-lyase family aluminum resistance protein.
 
     0.701
EHA60216.1
KEGG: pmf:P9303_21491 hypothetical protein.
 
   
 0.645
EHA63445.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_15401 hypothetical protein.
  
  
 0.643
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
  
 0.643
EHA60217.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; KEGG: pmf:P9303_21501 cobalt ABC transporter permease.
 
   
 0.607
der
GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
     
 0.549
EHA60361.1
TIGRFAM: Photosystem II S4; PFAM: RNA-binding S4; KEGG: pmt:PMT1433 hypothetical protein; SMART: RNA-binding S4.
 
    0.546
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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