STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60216.1KEGG: pmf:P9303_21491 hypothetical protein. (88 aa)    
Predicted Functional Partners:
EHA62241.1
Transcriptional regulator, Crp/Fnr family; TIGRFAM: Transcription regulator, NtcA; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; KEGG: pmg:P9301_02691 CRP family global nitrogen regulatory protein; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain.
  
 
 
 0.999
EHA60417.1
KEGG: pmf:P9303_04671 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
    
 
 0.999
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
  0.941
EHA63612.1
Regulatory protein Crp; PFAM: HTH transcriptional regulator, Crp; KEGG: pmj:P9211_09541 Crp family regulatory protein.
  
 
 
 0.910
EHA60217.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; KEGG: pmf:P9303_21501 cobalt ABC transporter permease.
 
  
 0.884
EHA63609.1
KEGG: pmf:P9303_17661 regulatory proteins, Crp family protein; PFAM: HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp.
  
 
 
 0.855
EHA63430.1
KEGG: pmf:P9303_15251 heat shock protein 90; PFAM: ATPase-like, ATP-binding domain; Heat shock protein Hsp90, C-terminal; SMART: ATPase-like, ATP-binding domain.
   
 0.853
EHA62477.1
Hypothetical protein; KEGG: cyc:PCC7424_2925 putative signal transduction protein with EFhand domain.
  
 
 
 0.844
EHA60215.1
Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
     
 0.829
EHA60224.1
Hypothetical protein; KEGG: amr:AM1_4956 glycosyl transferase, group 2 family protein.
  
 
  0.829
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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