STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60217.1ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; KEGG: pmf:P9303_21501 cobalt ABC transporter permease. (304 aa)    
Predicted Functional Partners:
EHA61760.1
KEGG: pmt:PMT1987 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 0.997
EHA63288.1
KEGG: pmt:PMT0788 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 0.996
EHA63637.1
PFAM: BioY protein; KEGG: pmf:P9303_16541 hypothetical protein.
   
 0.994
EHA61851.1
Nickel-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_28051 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
 0.988
der
GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.886
EHA60216.1
KEGG: pmf:P9303_21491 hypothetical protein.
 
  
 0.884
EHA59281.1
precorrin-3B C17-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; KEGG: pmt:PMT1772 bifunctional CbiH protein and precorrin-3B C17-methyltransferase; PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; Tetrapyrrole methylase.
  
  
 0.797
EHA64327.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_06461 putative multidrug efflux ABC transporter; SMART: ATPase, AAA+ type, core.
    
 0.768
EHA60215.1
Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.759
EHA64129.1
KEGG: pmf:P9303_18151 hypothetical protein.
  
     0.754
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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