STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60225.1KEGG: pmt:PMT0199 hypothetical protein. (208 aa)    
Predicted Functional Partners:
EHA60226.1
KEGG: pmf:P9303_21591 precorrin-2 C20-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; PFAM: Tetrapyrrole methylase.
       0.785
EHA62203.1
PFAM: Protein of unknown function DUF2555; KEGG: pmf:P9303_23881 hypothetical protein.
  
     0.752
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
  
     0.742
EHA60224.1
Hypothetical protein; KEGG: amr:AM1_4956 glycosyl transferase, group 2 family protein.
  
     0.704
EHA61914.1
KEGG: pmt:PMT1158 hypothetical protein.
  
     0.703
EHA59098.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT2273 hypothetical protein.
  
     0.694
EHA63131.1
KEGG: syf:Synpcc7942_0114 hypothetical protein.
  
     0.688
EHA60090.1
KEGG: amr:AM1_1790 hypothetical protein.
  
     0.672
EHA63150.1
TIGRFAM: NHPM bacteriocin system secretion protein, HylD; KEGG: ana:all2022 hypothetical protein.
  
     0.668
EHA62058.1
TIGRFAM: Photosystem II PsbQ, cyanobacteria; KEGG: cyj:Cyan7822_5451 photosystem II protein PsbQ.
  
     0.666
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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