Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHA59348.1 | EHA61828.1 | Syn8016DRAFT_2718 | Syn8016DRAFT_1900 | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | TIGRFAM: Isochorismate synthase; KEGG: pmf:P9303_27351 isochorismate synthase; PFAM: Chorismate binding, C-terminal. | 0.909 |
| EHA59348.1 | aroB | Syn8016DRAFT_2718 | Syn8016DRAFT_0503 | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.499 |
| EHA59348.1 | aroE | Syn8016DRAFT_2718 | Syn8016DRAFT_2804 | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.661 |
| EHA59348.1 | aroK | Syn8016DRAFT_2718 | Syn8016DRAFT_2424 | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.441 |
| EHA59348.1 | aroQ | Syn8016DRAFT_2718 | Syn8016DRAFT_2613 | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.529 |
| EHA59348.1 | panC/cmk | Syn8016DRAFT_2718 | Syn8016DRAFT_2737 | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family. | 0.568 |
| EHA60230.1 | aroQ | Syn8016DRAFT_2612 | Syn8016DRAFT_2613 | PFAM: tRNA-hydroxylase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.811 |
| EHA60375.1 | aroQ | Syn8016DRAFT_2162 | Syn8016DRAFT_2613 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.588 |
| EHA60375.1 | tig | Syn8016DRAFT_2162 | Syn8016DRAFT_2886 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.733 |
| EHA61828.1 | EHA59348.1 | Syn8016DRAFT_1900 | Syn8016DRAFT_2718 | TIGRFAM: Isochorismate synthase; KEGG: pmf:P9303_27351 isochorismate synthase; PFAM: Chorismate binding, C-terminal. | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | 0.909 |
| EHA61828.1 | aroA | Syn8016DRAFT_1900 | Syn8016DRAFT_0649 | TIGRFAM: Isochorismate synthase; KEGG: pmf:P9303_27351 isochorismate synthase; PFAM: Chorismate binding, C-terminal. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.562 |
| EHA61828.1 | aroE | Syn8016DRAFT_1900 | Syn8016DRAFT_2804 | TIGRFAM: Isochorismate synthase; KEGG: pmf:P9303_27351 isochorismate synthase; PFAM: Chorismate binding, C-terminal. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.622 |
| EHA61828.1 | aroQ | Syn8016DRAFT_1900 | Syn8016DRAFT_2613 | TIGRFAM: Isochorismate synthase; KEGG: pmf:P9303_27351 isochorismate synthase; PFAM: Chorismate binding, C-terminal. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.543 |
| aroA | EHA61828.1 | Syn8016DRAFT_0649 | Syn8016DRAFT_1900 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | TIGRFAM: Isochorismate synthase; KEGG: pmf:P9303_27351 isochorismate synthase; PFAM: Chorismate binding, C-terminal. | 0.562 |
| aroA | aroB | Syn8016DRAFT_0649 | Syn8016DRAFT_0503 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.995 |
| aroA | aroE | Syn8016DRAFT_0649 | Syn8016DRAFT_2804 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.981 |
| aroA | aroK | Syn8016DRAFT_0649 | Syn8016DRAFT_2424 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.976 |
| aroA | aroQ | Syn8016DRAFT_0649 | Syn8016DRAFT_2613 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.815 |
| aroA | panC/cmk | Syn8016DRAFT_0649 | Syn8016DRAFT_2737 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family. | 0.893 |
| aroB | EHA59348.1 | Syn8016DRAFT_0503 | Syn8016DRAFT_2718 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | KEGG: pmf:P9303_22721 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal. | 0.499 |
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