STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60237.1Cyclomaltodextrinase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: pmt:PMT0192 glycoside hydrolase family protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain. (485 aa)    
Predicted Functional Partners:
EHA63127.1
4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; KEGG: pmt:PMT1071 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77.
 
 
 0.954
EHA60240.1
Maltose alpha-D-glucosyltransferase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: cyb:CYB_0677 trehalose synthase/putative maltokinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
 
0.928
EHA62010.1
PFAM: Amino acid permease domain; KEGG: pmf:P9303_10831 hypothetical protein.
    
 0.905
EHA60203.1
KEGG: pmt:PMT0222 amino acid permease.
    
 0.905
EHA59093.1
TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase domain; Sucrose phosphate synthase, sucrose phosphatase-like domain; KEGG: pmf:P9303_30171 sucrose phosphate synthase; PFAM: Sucrose-phosphate synthase; Glycosyl transferase, group 1; Sucrose synthase.
   
 0.811
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.729
EHA64380.1
Isoamylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; KEGG: pmf:P9303_05691 putative isoamylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
 
 0.728
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.712
EHA62345.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.677
EHA63623.1
KEGG: pmf:P9303_18961 phosphatase/phosphohexomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase.
 
 
 0.637
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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