STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59270.1Peptidase S16 lon domain protein; KEGG: pmf:P9303_23671 ATP-dependent protease La; PFAM: Peptidase S16, lon N-terminal; SMART: Peptidase S16, lon N-terminal. (220 aa)    
Predicted Functional Partners:
EHA59339.1
UBA/THIF-type NAD/FAD binding protein; KEGG: pmf:P9303_22891 molybdopterin biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like.
    
 0.872
EHA59269.1
Tocopherol O-methyltransferase; KEGG: pmt:PMT1785 SAM-binding motif-containing protein; PFAM: Methyltransferase type 11; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
       0.807
EHA63212.1
SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: pmf:P9303_13301 RecF protein:ABC transporter.
    
 0.746
EHA63639.1
FHA modulated glycosyl transferase/transpeptidase; KEGG: syf:Synpcc7942_2000 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Forkhead-associated (FHA) domain; Penicillin-binding protein, transpeptidase; SMART: Forkhead-associated (FHA) domain.
     
 0.670
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
       0.669
EHA63469.1
KEGG: mxa:MXAN_6073 hypothetical protein.
     
 0.585
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
       0.456
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
       0.454
EHA63213.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pmf:P9303_13291 DNA repair exonuclease.
    
 0.430
EHA63467.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pmj:P9211_07941 putative transcripton factor.
    
 0.430
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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