STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59276.1KEGG: pmf:P9303_29351 AIR synthase related protein. (112 aa)    
Predicted Functional Partners:
EHA59277.1
KEGG: pmf:P9303_23591 hypothetical protein.
       0.774
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
     
 0.730
EHA63187.1
KEGG: pme:NATL1_14711 glutaredoxin-like protein; TIGRFAM: Monothiol glutaredoxin-related; PFAM: Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 0.700
EHA60183.1
Nitrogen-fixing NifU domain-containing protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: pmf:P9303_20981 NifU-like protein.
  
 
 0.655
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
     
 0.568
EHA63403.1
Cysteine desulfurase; KEGG: pmt:PMT0717 class-V aminotransferase family cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
  
 
 0.550
EHA61816.1
Cysteine desulfurase; KEGG: pmf:P9303_27201 NifS-like aminotransferase class-V; PFAM: Aminotransferase, class V/Cysteine desulfurase.
  
 
 0.550
EHA60565.1
TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: pmt:PMT1605 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
 
 0.534
EHA62280.1
Folate-binding protein YgfZ; KEGG: pmf:P9303_24971 aminomethyltransferase GcvT-like protein; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal.
    
 
 0.529
EHA59339.1
UBA/THIF-type NAD/FAD binding protein; KEGG: pmf:P9303_22891 molybdopterin biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like.
    
 0.519
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.