STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59341.1Conserved hypothetical protein CHP00268; KEGG: pmf:P9303_22871 ATP-utilizing enzymes of the PP-loop superfamily protein; TIGRFAM: Conserved hypothetical protein CHP00268; PFAM: Asparagine synthase. (275 aa)    
Predicted Functional Partners:
EHA64247.1
Protein of unknown function DUF111; KEGG: pmf:P9303_07031 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0272; PFAM: Uncharacterised protein family UPF0272; Belongs to the LarC family.
 
 0.987
EHA58605.1
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; PFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: pmf:P9303_19441 putative circadian phase modifier CpmA-like protein.
 
 
 0.986
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
 
    0.696
EHA59340.1
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: pmf:P9303_22881 hypothetical protein.
       0.606
EHA64317.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmt:PMT1348 aldo/keto reductase.
 
    0.568
EHA59342.1
TIGRFAM: Glutamate decarboxylase; KEGG: pmf:P9303_18041 glutamate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; Belongs to the group II decarboxylase family.
       0.554
EHA60433.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmf:P9303_04491 aldo/keto reductase family protein.
 
    0.548
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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