STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59342.1TIGRFAM: Glutamate decarboxylase; KEGG: pmf:P9303_18041 glutamate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; Belongs to the group II decarboxylase family. (464 aa)    
Predicted Functional Partners:
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
     
 0.929
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
     
 0.876
EHA62472.1
KR domain protein; KEGG: gvi:gll4226 modular polyketide synthase; PFAM: Polyketide synthase, KR; SMART: Polyketide synthase/Fatty acid synthase, KR.
     
 0.876
panC/cmk
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
  
 
 0.756
EHA62967.1
KEGG: pmt:PMT0473 NADH-ubiquinone/plastoquinone.
 
     0.711
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.676
EHA62321.1
KEGG: pmf:P9303_25471 selenide, water dikinase; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; Selenide water dikinase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; AIR synthase-related protein; AIR synthase-related protein, C-terminal.
     
 0.616
EHA62286.1
Glu/Leu/Phe/Val dehydrogenase dimerization region; KEGG: pmh:P9215_04071 glutamate dehydrogenase/leucine dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.600
EHA58634.1
PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: pmt:PMT1569 PA-phosphatase-like phosphoesterase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
    
 0.600
EHA63371.1
PFAM: Glucose-inhibited division protein A-related; KEGG: pmt:PMT0742 hypothetical protein.
    
 0.594
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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