STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59355.1KEGG: pmf:P9303_22651 hypothetical protein. (184 aa)    
Predicted Functional Partners:
EHA59354.1
KEGG: pmt:PMT1705 N-acetylmuramoyl-L-alanine amidase.
       0.802
EHA64321.1
KEGG: pmt:PMT1344 hypothetical protein.
  
     0.774
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.774
EHA63189.1
KEGG: pmf:P9303_09541 hypothetical protein.
  
     0.772
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.772
EHA63052.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT1147 putative dienelactone hydrolase.
  
     0.771
EHA62269.1
KEGG: pmt:PMT1859 hypothetical protein.
  
     0.771
EHA60111.1
PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: pmt:PMT0320 hypothetical protein.
  
     0.771
EHA63949.1
KEGG: pmj:P9211_05761 hypothetical protein.
  
     0.770
EHA60360.1
KEGG: pmf:P9303_05231 hypothetical protein.
  
     0.770
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.