STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59356.1Transcriptional regulator PadR family protein; PFAM: Transcription regulator PadR N-terminal-like; KEGG: tel:tlr1955 period-extender gene product. (127 aa)    
Predicted Functional Partners:
EHA63281.1
KEGG: pmt:PMT0793 ribonucleotide reductase (class II); TIGRFAM: Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.745
EHA63321.1
KEGG: cyn:Cyan7425_3740 hypothetical protein.
  
     0.742
EHA64187.1
Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.733
EHA63705.1
PFAM: Protein of unknown function DUF1816; KEGG: pmt:PMT0649 hypothetical protein.
  
     0.725
EHA60650.1
KEGG: pmt:PMT1970 hypothetical protein.
  
     0.697
EHA59355.1
KEGG: pmf:P9303_22651 hypothetical protein.
       0.694
EHA63256.1
KEGG: pmt:PMT0811 hypothetical protein.
  
     0.690
EHA64274.1
KEGG: cyn:Cyan7425_3822 hypothetical protein.
  
     0.687
EHA62275.1
KEGG: syf:Synpcc7942_1650 phosphorylase kinase alpha subunit.
  
     0.678
EHA63456.1
KEGG: pmt:PMT0671 hypothetical protein.
  
     0.676
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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