STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59389.1KEGG: cyp:PCC8801_4525 phycoerythrin-associated linker protein, CpeR. (102 aa)    
Predicted Functional Partners:
cpcT-2
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
    
 0.855
cpcS-4
Protein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
    
 0.753
EHA59393.1
PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; KEGG: gvi:glr2806 putative phycobiliprotein linker; Belongs to the phycobilisome linker protein family.
    
 0.603
EHA59394.1
PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; KEGG: cyp:PCC8801_4529 phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
    
 0.582
EHA59380.1
PFAM: PBS lyase HEAT-like repeat; HEAT; KEGG: pmt:PMT1681 putative bilin biosynthesis protein CpeZ.
     
 0.545
EHA59392.1
PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; KEGG: gvi:gvip183 phycoerythrin-associated linker protein; Belongs to the phycobilisome linker protein family.
    
 0.543
EHA59378.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: cyj:Cyan7822_4043 phycocyanin.
     
 0.532
EHA59381.1
PFAM: PBS lyase HEAT-like repeat; KEGG: pmt:PMT1680 hypothetical protein.
     
 0.477
EHA59379.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: gvi:gvip159 phycoerythrin alpha chain.
     
 0.470
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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