STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59394.1PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; KEGG: cyp:PCC8801_4529 phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. (294 aa)    
Predicted Functional Partners:
EHA59378.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: cyj:Cyan7822_4043 phycocyanin.
  
 
 0.976
EHA59385.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: ter:Tery_0984 phycobilisome protein.
  
 
 0.976
EHA60411.1
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 0.971
EHA59379.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: gvi:gvip159 phycoerythrin alpha chain.
  
 
 0.971
EHA59384.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: ter:Tery_0983 phycobilisome protein.
  
 
 0.962
EHA59372.1
KEGG: cyt:cce_2652 phycocyanin alpha subunit; TIGRFAM: Phycocyanin, alpha subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
 
 0.957
EHA59373.1
KEGG: mar:MAE_24450 phycocyanin beta subunit; TIGRFAM: Phycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
 
 0.957
EHA59397.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: npu:Npun_F0735 phycobilisome protein.
 
 
 
 0.956
EHA63377.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: cyn:Cyan7425_1034 phycobilisome protein.
  
 
 
 0.942
EHA60409.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0327 allophycocyanin alpha chain.
  
 
 
 0.942
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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