STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59406.1KEGG: pmt:PMT1673 hypothetical protein. (165 aa)    
Predicted Functional Partners:
EHA59419.1
SMF family protein; PFAM: DNA recombination-mediator protein A; KEGG: pmt:PMT1661 smf family protein.
  
 
 0.704
EHA59334.1
KEGG: pmt:PMT1724 arogenate dehydrogenase; PFAM: Prephenate dehydrogenase.
   
  
 0.678
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
  0.665
EHA63257.1
PFAM: Phosphoribosyltransferase; KEGG: pmt:PMT0810 adenine phosphoribosyltransferase.
   
    0.664
EHA61811.1
KEGG: pmt:PMT2039 N-acetylglucosamine-6-phosphate deacetylase.
  
    0.656
EHA59188.1
Teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; KEGG: pme:NATL1_20941 hypothetical protein; SMART: ATPase, AAA+ type, core.
   
    0.641
EHA63778.1
TIGRFAM: Conserved hypothetical protein CHP03299, phage/plasmid-related; KEGG: cyj:Cyan7822_0471 phage/plasmid-like protein TIGR03299.
   
    0.575
EHA61888.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: pmt:PMT2126 phage integrase; Belongs to the 'phage' integrase family.
   
    0.575
EHA60535.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: cyc:PCC7424_5548 integrase family protein; Belongs to the 'phage' integrase family.
   
    0.575
EHA64365.1
KEGG: pmt:PMT1301 hypothetical protein.
  
 
 0.566
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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