STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59408.1PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: pmt:PMT1671 carbohydrate kinase. (423 aa)    
Predicted Functional Partners:
EHA63853.1
TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: pmf:P9303_16821 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.926
EHA63857.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.909
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.902
EHA60560.1
KEGG: rhi:NGR_b11590 L-fuculose phosphate aldolase; PFAM: Class II aldolase/adducin, N-terminal.
  
 
 0.879
EHA60239.1
KEGG: mrb:Mrub_2890 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase.
  
 
 0.814
EHA62430.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.807
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
       0.806
EHA64160.1
KEGG: pmt:PMT1200 putative carboxysome peptide B; TIGRFAM: Carboxysome peptide B; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml.
  
     0.736
EHA64161.1
KEGG: pmf:P9303_08131 putative carboxysome peptide A; TIGRFAM: Carboxysome peptide A; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml.
  
     0.730
EHA64162.1
KEGG: pmf:P9303_08121 carboxysome shell protein CsoS3; TIGRFAM: Carboxysome shell carbonic anhydrase; PFAM: Carboxysome shell carbonic anhydrase.
  
     0.727
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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