Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA59410.1HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: pmf:P9303_22171 haloacid dehalogenase/epoxide hydrolase family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase. (263 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
  0.863
EHA64164.1
PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: pmj:P9211_05531 ribulose bisphosphate carboxylase, small chain; SMART: Ribulose bisphosphate carboxylase, small chain.
     
 0.852
EHA62338.1
Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: pmf:P9303_25781 Fe-S oxidoreductase.
     
 0.852
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
     
  0.849
EHA64253.1
D-lactate dehydrogenase (cytochrome); KEGG: pmf:P9303_06971 putative glycolate oxidase subunit GlcD; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
     
 0.849
EHA62340.1
PFAM: FAD linked oxidase, N-terminal; KEGG: pmf:P9303_25811 putative glycolate oxidase subunit GlcE.
     
 0.825
EHA59411.1
RNA binding S1 domain protein; KEGG: pmt:PMT1668 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1.
  
    0.803
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.723
EHA59408.1
PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: pmt:PMT1671 carbohydrate kinase.
       0.712
EHA62054.1
Cl- channel voltage-gated family protein; PFAM: Chloride channel, voltage gated; KEGG: pmf:P9303_29991 putative chloride channel.
  
 
  0.627
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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