STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59094.1KEGG: pmf:P9303_30181 esterase/lipase/thioesterase family protein. (504 aa)    
Predicted Functional Partners:
EHA59098.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT2273 hypothetical protein.
 
     0.829
uvrA
UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.782
EHA64046.1
PFAM: Protein of unknown function DUF490; KEGG: pmt:PMT0438 hypothetical protein.
  
     0.753
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
  
     0.753
EHA62061.1
Porin; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.750
EHA62251.1
KEGG: pmf:P9303_24661 hypothetical protein.
  
     0.748
EHA63368.1
Protein of unknown function DUF1239; PFAM: Lipopolysccharide assembly, LptC-related; KEGG: pmf:P9303_14731 hypothetical protein.
  
     0.728
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.728
EHA62204.1
KEGG: pmf:P9303_07051 hypothetical protein.
  
     0.721
EHA62445.1
KEGG: pmt:PMT0149 hypothetical protein.
  
     0.718
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.