STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59106.1PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmt:PMT0006 hypothetical protein. (299 aa)    
Predicted Functional Partners:
queG
Iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
       0.800
EHA62438.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmf:P9303_01941 Tfp pilus assembly protein PilF.
  
     0.762
EHA60135.1
KEGG: pmt:PMT0296 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
  
 0.732
EHA58654.1
KEGG: cyt:cce_2852 hypothetical protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SMART: Tetratricopeptide repeat.
  
  
  0.732
EHA63474.1
PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: pmf:P9303_28691 hypothetical protein.
 
  
 0.710
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.680
EHA59105.1
PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; KEGG: pmf:P9303_00041 DNA gyrase/topoisomerase IV, subunit A; SMART: DNA topoisomerase, type IIA, subunit A/C-terminal.
     
 0.600
EHA60233.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ana:alr4878 two-component hybrid sensor and regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain.
     
 0.548
EHA59108.1
KEGG: pmt:PMT0008 hypothetical protein.
       0.531
EHA60532.1
PFAM: Tetratricopeptide TPR-1; KEGG: amr:AM1_5932 pentapeptide repeat-containing serine/threonine kinase.
 
  
 0.521
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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