Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHA59109.1PFAM: Protein of unknown function DUF502; KEGG: pmt:PMT0009 hypothetical protein. (248 aa)    
Predicted Functional Partners:
EHA59110.1
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.760
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.760
EHA59108.1
KEGG: pmt:PMT0008 hypothetical protein.
       0.594
EHA59112.1
KEGG: pmt:PMT0012 protein phosphatase 2C domain-containing protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like.
       0.529
queG
Iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
       0.527
EHA59106.1
PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmt:PMT0006 hypothetical protein.
       0.526
EHA59105.1
PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; KEGG: pmf:P9303_00041 DNA gyrase/topoisomerase IV, subunit A; SMART: DNA topoisomerase, type IIA, subunit A/C-terminal.
       0.455
argH
PFAM: Lyase 1, N-terminal; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: pmf:P9303_00121 argininosuccinate lyase.
       0.408
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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