STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59135.1KEGG: pmt:PMT0036 HNH endonuclease:HNH nuclease; PFAM: HNH endonuclease; SMART: HNH nuclease. (143 aa)    
Predicted Functional Partners:
EHA59136.1
Helicase domain protein; KEGG: pmf:P9303_00371 superfamily II DNA/RNA helicases, SNF2 family protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal.
       0.467
EHA59295.1
KEGG: pmf:P9303_23331 HNH endonuclease family protein; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
     0.449
EHA59134.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmt:PMT0034 hypothetical protein.
       0.440
EHA63612.1
Regulatory protein Crp; PFAM: HTH transcriptional regulator, Crp; KEGG: pmj:P9211_09541 Crp family regulatory protein.
  
     0.431
EHA60110.1
KEGG: pmm:PMM1307 hypothetical protein.
  
     0.417
EHA63146.1
KEGG: pmt:PMT1075 hypothetical protein.
  
     0.416
EHA63233.1
PFAM: FAD linked oxidase, N-terminal; KEGG: pmf:P9303_12191 FAD linked oxidase, N-terminal.
  
     0.402
EHA63052.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT1147 putative dienelactone hydrolase.
  
     0.401
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.