STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59139.1TIGRFAM: AbrB duplication, membrane protein; KEGG: pmf:P9303_00391 hypothetical protein. (171 aa)    
Predicted Functional Partners:
EHA63052.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT1147 putative dienelactone hydrolase.
  
     0.669
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.662
EHA63991.1
KEGG: pme:NATL1_11941 hypothetical protein.
  
     0.645
EHA64026.1
KEGG: pmf:P9303_18671 hypothetical protein.
  
     0.627
EHA63628.1
KEGG: pmt:PMT0386 putative DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease.
  
     0.625
EHA63146.1
KEGG: pmt:PMT1075 hypothetical protein.
  
     0.596
EHA59138.1
KEGG: pmf:P9303_00381 penicillin amidase.
       0.590
EHA64116.1
KEGG: pmf:P9303_18311 6-pyruvoyl-tetrahydropterin synthase.
  
     0.582
EHA59137.1
Hypothetical protein.
       0.582
EHA63206.1
KEGG: pmt:PMT0859 hypothetical protein.
  
     0.574
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.