STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59160.1NC domain protein; PFAM: NC; KEGG: pmt:PMT0060 hypothetical protein. (231 aa)    
Predicted Functional Partners:
EHA60233.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ana:alr4878 two-component hybrid sensor and regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain.
    
 
 0.782
clpX
ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
       0.766
dnaX
DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.724
EHA60549.1
KEGG: pmf:P9303_03171 hypothetical protein.
  
     0.709
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.672
EHA61875.1
KEGG: pmf:P9303_27821 hypothetical protein.
  
     0.630
EHA63135.1
KEGG: pmt:PMT1064 hypothetical protein.
  
     0.628
EHA60556.1
KEGG: pmf:P9303_03111 hypothetical protein.
  
   
 0.618
EHA63131.1
KEGG: syf:Synpcc7942_0114 hypothetical protein.
  
     0.557
EHA60548.1
KEGG: pmt:PMT1592 hypothetical protein.
  
   
 0.553
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.