STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59169.1Protein of unknown function DUF561; PFAM: Uncharacterised protein family Ycf23; KEGG: pmt:PMT0069 hypothetical protein. (265 aa)    
Predicted Functional Partners:
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
    
 0.918
EHA59415.1
PFAM: Ferredoxin; KEGG: pmt:PMT1664 ferredoxin.
  
  
  0.777
EHA59327.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; KEGG: pmf:P9303_23001 Fe-S-cluster-containing hydrogenase components 2.
  
     0.770
ndhN
NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.769
EHA62356.1
KEGG: pme:NATL1_20551 hypothetical protein.
  
     0.765
ndhM
NAD(P)H-quinone oxidoreductase subunit M; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.764
EHA60395.1
KEGG: pmt:PMT1463 hypothetical protein.
  
     0.763
EHA64177.1
PFAM: Protein of unknown function DUF1817; KEGG: amr:AM1_6353 hypothetical protein.
  
     0.761
EHA63335.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: pmf:P9303_14501 Fe-S-cluster oxidoreductase.
  
     0.757
EHA63192.1
Protein of unknown function DUF2488; PFAM: Uncharacterised protein family Ycf54; KEGG: syf:Synpcc7942_0988 hypothetical protein.
  
     0.747
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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