STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA59192.1Sulfotransferase; KEGG: aae:aq_1088 hypothetical protein; PFAM: Sulfotransferase domain; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat. (757 aa)    
Predicted Functional Partners:
EHA59193.1
PFAM: Hemolysin-type calcium-binding repeat; KEGG: cyc:PCC7424_1242 hemolysin-type calcium-binding region.
 
     0.712
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.635
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
    
 0.596
EHA61906.1
PFAM: CHASE2; KEGG: pmf:P9303_03401 hypothetical protein.
    
  0.556
EHA61907.1
Hypothetical protein.
    
  0.556
EHA61908.1
Adenylate/guanylate cyclase with Chase sensor; KEGG: pmf:P9303_03401 hypothetical protein; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase.
    
  0.556
EHA59191.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_01271 glycosyltransferase.
    
  0.498
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
    0.420
EHA58654.1
KEGG: cyt:cce_2852 hypothetical protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SMART: Tetratricopeptide repeat.
  
  
  0.416
EHA63639.1
FHA modulated glycosyl transferase/transpeptidase; KEGG: syf:Synpcc7942_2000 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Forkhead-associated (FHA) domain; Penicillin-binding protein, transpeptidase; SMART: Forkhead-associated (FHA) domain.
    
  0.413
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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