STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58604.1TIGRFAM: Conserved hypothetical protein CHP03792; KEGG: pmf:P9303_19451 hypothetical protein. (152 aa)    
Predicted Functional Partners:
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.773
EHA58605.1
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; PFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: pmf:P9303_19441 putative circadian phase modifier CpmA-like protein.
       0.773
EHA63991.1
KEGG: pme:NATL1_11941 hypothetical protein.
  
     0.771
EHA63837.1
Lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; KEGG: pmf:P9303_14281 lysophospholipase L1.
  
     0.741
EHA62061.1
Porin; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.710
EHA64039.1
KEGG: pmf:P9303_18501 hypothetical protein.
  
     0.696
EHA63891.1
KEGG: pmf:P9303_17441 hypothetical protein.
  
     0.693
EHA64367.1
KEGG: pmf:P9303_10261 hypothetical protein.
  
     0.679
EHA64246.1
KEGG: pmf:P9303_07041 hypothetical protein.
  
     0.670
EHA62056.1
PFAM: O-antigen ligase-related; KEGG: pmf:P9303_30011 hypothetical protein.
  
     0.666
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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