STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58605.11-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; PFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: pmf:P9303_19441 putative circadian phase modifier CpmA-like protein. (221 aa)    
Predicted Functional Partners:
EHA59341.1
Conserved hypothetical protein CHP00268; KEGG: pmf:P9303_22871 ATP-utilizing enzymes of the PP-loop superfamily protein; TIGRFAM: Conserved hypothetical protein CHP00268; PFAM: Asparagine synthase.
 
 
 0.986
EHA64247.1
Protein of unknown function DUF111; KEGG: pmf:P9303_07031 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0272; PFAM: Uncharacterised protein family UPF0272; Belongs to the LarC family.
 
  
 0.899
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.815
EHA58604.1
TIGRFAM: Conserved hypothetical protein CHP03792; KEGG: pmf:P9303_19451 hypothetical protein.
       0.773
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: SAICAR synthetase; KEGG: pmf:P9303_05481 phosphoribosylaminoimidazole-succinocarboxamide synthase.
    
  0.731
EHA64409.1
KaiA family protein; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC hexamer pho [...]
      
 0.585
EHA64408.1
PFAM: KaiB domain; KEGG: pmf:P9303_05431 circadian clock protein KaiB.
      
 0.574
kaiC
Putative circadian clock protein, KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family.
      
 0.572
EHA64317.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmt:PMT1348 aldo/keto reductase.
 
    0.486
EHA60433.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmf:P9303_04491 aldo/keto reductase family protein.
 
    0.477
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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