STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58607.1KEGG: pmf:P9303_19411 hypothetical protein. (300 aa)    
Predicted Functional Partners:
EHA63352.1
KEGG: pmf:P9303_14701 beta-propeller domain-containing protein.
  
     0.720
EHA62265.1
PFAM: Protein of unknown function DUF1997; KEGG: pmf:P9303_24831 hypothetical protein.
  
     0.690
EHA63321.1
KEGG: cyn:Cyan7425_3740 hypothetical protein.
  
     0.675
EHA63008.1
KEGG: pmt:PMT1182 hypothetical protein.
  
     0.660
EHA60434.1
KEGG: pmf:P9303_04481 3Fe-4S ferredoxin.
  
     0.650
EHA59082.1
KEGG: pmt:PMT2258 hypothetical protein.
  
     0.649
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.630
EHA58608.1
KEGG: pmf:P9303_19401 hypothetical protein; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS.
       0.612
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.609
EHA62266.1
KEGG: syf:Synpcc7942_0398 hypothetical protein.
  
     0.605
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.