STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58617.1PFAM: ABC-1; KEGG: cyb:CYB_0141 hypothetical protein. (547 aa)    
Predicted Functional Partners:
EHA63283.1
PFAM: Methyltransferase type 12; KEGG: pmt:PMT0792 hypothetical protein.
    
 0.492
EHA63490.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_18721 hypothetical protein.
    
 0.492
EHA63617.1
UbiD family decarboxylase; KEGG: pmf:P9303_18901 3-polyprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; Belongs to the UbiD family.
     
 0.492
EHA64418.1
PFAM: Methyltransferase type 12; KEGG: pme:NATL1_17731 hypothetical protein.
    
 0.492
EHA62381.1
PFAM: Methyltransferase type 11; KEGG: pmc:P9515_14091 hypothetical protein.
    
 0.492
EHA61812.1
TIGRFAM: Magnesium protoporphyrin O-methyltransferase; KEGG: pmt:PMT2040 Mg-protoporphyrin IX methyl transferase; PFAM: Magnesium-protoporphyrin IX methyltransferase, C-terminal.
    
 0.492
EHA60407.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_04751 methyltransferase.
    
 0.492
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.490
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
   
 
 0.471
ndhJ
NAD(P)H-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
 0.471
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.