STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58618.1PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmf:P9303_11831 zeta-carotene desaturase-like protein. (541 aa)    
Predicted Functional Partners:
EHA63083.1
TIGRFAM: Lycopene cyclase, beta/epsilon; KEGG: pmf:P9303_09161 putative lycopene beta cyclase; PFAM: Lycopene cyclase-type, FAD-binding.
  
  
 0.880
EHA62223.1
PFAM: Fatty acid desaturase, type 1; KEGG: pmt:PMT1816 beta carotene hydroxylase.
     
 0.865
EHA60648.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
  0.754
EHA63440.1
KEGG: pmf:P9303_15341 hypothetical protein.
  
     0.740
EHA63926.1
PFAM: Cytochrome c, class I; KEGG: pmf:P9303_17581 cytochrome c, class IC:cytochrome c, class I.
  
     0.718
EHA64056.1
PFAM: Cytochrome c, class I; KEGG: npu:Npun_R2788 cytochrome c, class I.
  
     0.712
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
     0.692
EHA63439.1
Protein of unknown function DUF2499; PFAM: Uncharacterised protein family Ycf49; KEGG: pmt:PMT0689 hypothetical protein.
  
     0.687
EHA63594.1
KEGG: pmt:PMT0409 hypothetical protein.
  
     0.674
EHA63993.1
KEGG: pmf:P9303_17751 hypothetical protein.
  
     0.652
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.