STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58632.1KEGG: pmt:PMT1514 neuromedin U. (336 aa)    
Predicted Functional Partners:
EHA63310.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: rle:RL1925 hypothetical protein.
  
     0.772
EHA63311.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pfl:PFL_2854 putative lipoprotein.
  
     0.772
EHA58627.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pmf:P9303_04201 hypothetical protein.
  
     0.772
EHA58628.1
PFAM: Domain of unknown function DUF1254; Domain of unknown function DUF1214; KEGG: pmf:P9303_04191 hypothetical protein.
  
     0.772
EHA58637.1
PFAM: Sulfatase; KEGG: pmt:PMT1515 sulfatase.
  
     0.757
EHA63308.1
PFAM: Domain of unknown function DUF1214; KEGG: cps:CPS_0844 putative lipoprotein.
  
     0.751
EHA61862.1
KEGG: rlg:Rleg_6124 hypothetical protein.
  
   
 0.739
EHA61863.1
KEGG: rlg:Rleg_6123 hypothetical protein.
  
     0.737
EHA58624.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pmf:P9303_03471 hypothetical protein.
  
     0.728
EHA58625.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pmf:P9303_03471 hypothetical protein.
  
     0.715
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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