STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58638.1PFAM: Bile acid:sodium symporter; KEGG: pmf:P9303_19491 sodium dependent transporter. (286 aa)    
Predicted Functional Partners:
EHA63081.1
KEGG: pmf:P9303_09141 hypothetical protein.
  
     0.707
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.682
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
     0.643
EHA62226.1
KEGG: pmj:P9211_02621 hypothetical protein.
  
     0.638
EHA59261.1
PFAM: Abortive infection protein; KEGG: pmt:PMT1793 abortive infection protein.
  
    0.619
EHA63691.1
KEGG: syc:syc1602_d hypothetical protein.
  
     0.614
EHA64177.1
PFAM: Protein of unknown function DUF1817; KEGG: amr:AM1_6353 hypothetical protein.
  
     0.604
EHA61970.1
KEGG: pmf:P9303_08401 hypothetical protein.
  
     0.603
EHA62058.1
TIGRFAM: Photosystem II PsbQ, cyanobacteria; KEGG: cyj:Cyan7822_5451 photosystem II protein PsbQ.
  
     0.580
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.565
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.