STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58640.1KEGG: mep:MPQ_1001 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain. (358 aa)    
Predicted Functional Partners:
EHA58639.1
SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: cps:CPS_0840 AraC family transcriptional regulator.
 
    
0.560
EHA58641.1
KEGG: plm:Plim_0831 hypothetical protein.
       0.531
EHA64413.1
SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: tmz:Tmz1t_2976 transcriptional regulator, AraC family.
 
 
0.458
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.