STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58646.1Glucosylceramidase; KEGG: pmf:P9303_19251 bile acid beta-glucosidase. (833 aa)    
Predicted Functional Partners:
EHA63640.1
Small GTP-binding protein; KEGG: pmf:P9303_16501 GTPase SAR1 and related small G proteins; TIGRFAM: Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related.
  
 
 0.958
EHA63582.1
PFAM: Putative endonuclease, Z1 domain; KEGG: pmi:PMT9312_0373 endonuclease.
    
 0.952
EHA63182.1
KEGG: cyc:PCC7424_5159 hypothetical protein.
  
     0.716
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
 
   0.703
EHA58647.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.693
EHA58648.1
KEGG: nhl:Nhal_0119 addiction module toxin, Txe/YoeB family; TIGRFAM: Addiction module toxin, Txe/YoeB; Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system.
       0.693
EHA63135.1
KEGG: pmt:PMT1064 hypothetical protein.
  
     0.690
EHA64177.1
PFAM: Protein of unknown function DUF1817; KEGG: amr:AM1_6353 hypothetical protein.
  
     0.655
EHA60371.1
KEGG: syf:Synpcc7942_1129 hypothetical protein.
    
 0.646
EHA59331.1
PFAM: Protein of unknown function DUF1815; KEGG: syf:Synpcc7942_0657 hypothetical protein.
  
     0.641
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.