STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58654.1KEGG: cyt:cce_2852 hypothetical protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SMART: Tetratricopeptide repeat. (1082 aa)    
Predicted Functional Partners:
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
    
 0.902
EHA60371.1
KEGG: syf:Synpcc7942_1129 hypothetical protein.
   
  0.849
EHA58651.1
PFAM: Methyltransferase type 11; KEGG: har:HEAR0460 hypothetical protein.
       0.774
EHA58652.1
Hypothetical protein.
       0.773
EHA58653.1
Hypothetical protein.
       0.773
EHA59106.1
PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmt:PMT0006 hypothetical protein.
  
  
  0.732
EHA60135.1
KEGG: pmt:PMT0296 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
 
 0.544
EHA60532.1
PFAM: Tetratricopeptide TPR-1; KEGG: amr:AM1_5932 pentapeptide repeat-containing serine/threonine kinase.
 
 
 0.540
EHA63474.1
PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: pmf:P9303_28691 hypothetical protein.
  
 
 0.521
EHA62420.1
Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein; KEGG: pmc:P9515_13861 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis.
     
 0.501
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.