STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA58655.1Adenoviral fiber protein (repeat/shaft region); PFAM: Adenoviral fibre protein, repeat/shaft region; Hep/Hag; KEGG: bpr:GBP346_A2154 Hep_Hag family protein. (1040 aa)    
Predicted Functional Partners:
EHA63358.1
KEGG: nha:Nham_3087 outer membrane autotransporter barrel.
     
 0.478
EHA63072.1
KEGG: pmf:P9303_08961 hypothetical protein.
     
 0.466
EHA58654.1
KEGG: cyt:cce_2852 hypothetical protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SMART: Tetratricopeptide repeat.
     
 0.461
EHA58651.1
PFAM: Methyltransferase type 11; KEGG: har:HEAR0460 hypothetical protein.
       0.458
EHA58652.1
Hypothetical protein.
       0.458
EHA58653.1
Hypothetical protein.
       0.458
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.