STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmrRHeavy metal-dependent transcriptional regulator, MerR family; Function of strongly homologous gene; regulator. (519 aa)    
Predicted Functional Partners:
XM1_0013
Conserved protein of unknown function (Multidrug resistance efflux transporter 5-106); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.955
dnaK
Chaperone Hsp70, co-chaperone with DnaJ; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.906
hscA
DnaK-like molecular chaperone specific for IscU; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
  
 0.906
XM1_2231
Putative Molecular chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 0.906
cnrT
Cobalt-nickel-resistance system transmembrane protein; Function of strongly homologous gene; transporter.
 
     0.887
XM1_0015
Putative site-specific recombinase, resolvase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.887
groL
Cpn60 chaperonin GroEL, large subunit of GroESL(Chaperonin Cpn60/TCP-1,23-525); Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.875
XM1_4448
DnaJ-class molecular chaperone; Function of strongly homologous gene; factor.
  
 0.848
XM1_0183
Conserved protein of unknown function(DnaJ N-terminal domain-containing protein) Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 0.812
dnaJ
Chaperone Hsp40, co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interaction [...]
  
 0.812
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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